Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf2Q8BZT2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh3rf2Q8BZT2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3rf2Q8BZT2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sh3rf2Q8BZT2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf2Q8BZT2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms