Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Gm715-201ENSMUST00000117865 831 ntBASIC14.55□□□□□ -0.08
SprnQ8BWU1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 App-207ENSMUST00000227737 2827 ntBASIC14.55□□□□□ -0.08
SprnQ8BWU1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.55□□□□□ -0.08
SprnQ8BWU1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.55□□□□□ -0.08
SprnQ8BWU1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.55□□□□□ -0.08
SprnQ8BWU1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Gm37025-201ENSMUST00000195159 829 ntBASIC14.54□□□□□ -0.08
SprnQ8BWU1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SprnQ8BWU1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.53□□□□□ -0.08
SprnQ8BWU1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SprnQ8BWU1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SprnQ8BWU1 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.53□□□□□ -0.08
SprnQ8BWU1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SprnQ8BWU1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SprnQ8BWU1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.52□□□□□ -0.08
SprnQ8BWU1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SprnQ8BWU1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SprnQ8BWU1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms