Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Gm10252-201ENSMUST00000209541 832 ntBASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf7Q8BTV2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf7Q8BTV2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Gm18666-201ENSMUST00000190039 958 ntBASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf7Q8BTV2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpsf7Q8BTV2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Prob1-201ENSMUST00000097619 3021 ntBASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpsf7Q8BTV2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms