Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rd3Q8BRE0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rd3Q8BRE0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Rd3Q8BRE0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rd3Q8BRE0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rd3Q8BRE0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.42■□□□□ 0.38
Rd3Q8BRE0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rd3Q8BRE0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Gm5867-201ENSMUST00000063197 592 ntBASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rd3Q8BRE0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rd3Q8BRE0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rd3Q8BRE0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rd3Q8BRE0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rd3Q8BRE0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rd3Q8BRE0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.39■□□□□ 0.37
Rd3Q8BRE0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms