Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4Q8BQZ5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4Q8BQZ5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Gm18032-201ENSMUST00000222541 538 ntBASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4Q8BQZ5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4Q8BQZ5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4Q8BQZ5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.96■□□□□ 0.14
Cpsf4Q8BQZ5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4Q8BQZ5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4Q8BQZ5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4Q8BQZ5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Gm16061-201ENSMUST00000122167 857 ntBASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4Q8BQZ5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms