Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Mir1199-201ENSMUST00000117015 119 ntBASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.38□□□□□ -0.11
Cdhr3Q8BL00 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdhr3Q8BL00 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms