Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tubgcp5Q8BKN5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tubgcp5Q8BKN5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tubgcp5Q8BKN5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Gm9731-201ENSMUST00000209480 747 ntBASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubgcp5Q8BKN5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tubgcp5Q8BKN5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubgcp5Q8BKN5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms