Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srrm4Q8BKA3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srrm4Q8BKA3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Srrm4Q8BKA3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Srrm4Q8BKA3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm4Q8BKA3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm4Q8BKA3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Gm9013-201ENSMUST00000132939 882 ntBASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Gm25016-201ENSMUST00000158399 131 ntBASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Gm5587-201ENSMUST00000206270 674 ntBASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm4Q8BKA3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gm6345-202ENSMUST00000180900 204 ntBASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gm37722-201ENSMUST00000193757 208 ntBASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm4Q8BKA3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm4Q8BKA3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms