Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nop53Q8BK35 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Gm13836-201ENSMUST00000121159 501 ntBASIC17.66■□□□□ 0.42
Nop53Q8BK35 Il3ra-202ENSMUST00000223589 738 ntBASIC17.66■□□□□ 0.42
Nop53Q8BK35 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nop53Q8BK35 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nop53Q8BK35 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nop53Q8BK35 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Nop53Q8BK35 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nop53Q8BK35 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nop53Q8BK35 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.64■□□□□ 0.41
Nop53Q8BK35 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Gm7977-201ENSMUST00000193787 748 ntBASIC17.64■□□□□ 0.41
Nop53Q8BK35 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nop53Q8BK35 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.63■□□□□ 0.41
Nop53Q8BK35 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.63■□□□□ 0.41
Nop53Q8BK35 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.63■□□□□ 0.41
Nop53Q8BK35 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nop53Q8BK35 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nop53Q8BK35 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms