Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Rnf38Q8BI21 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf38Q8BI21 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf38Q8BI21 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf38Q8BI21 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf38Q8BI21 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gm715-201ENSMUST00000117865 831 ntBASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf38Q8BI21 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Gm18958-201ENSMUST00000174258 762 ntBASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.87■□□□□ 0.13
Rnf38Q8BI21 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf38Q8BI21 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms