Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubp1Q811S7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.23■□□□□ 0.19
Ubp1Q811S7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubp1Q811S7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ubp1Q811S7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Gm18421-201ENSMUST00000204122 625 ntBASIC16.22■□□□□ 0.19
Ubp1Q811S7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubp1Q811S7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.21■□□□□ 0.19
Ubp1Q811S7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Gm9013-201ENSMUST00000132939 882 ntBASIC16.21■□□□□ 0.19
Ubp1Q811S7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Gm5587-201ENSMUST00000206270 674 ntBASIC16.21■□□□□ 0.19
Ubp1Q811S7 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.21■□□□□ 0.19
Ubp1Q811S7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubp1Q811S7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ubp1Q811S7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.21■□□□□ 0.18
Ubp1Q811S7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubp1Q811S7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.2■□□□□ 0.18
Ubp1Q811S7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.2■□□□□ 0.18
Ubp1Q811S7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Ubp1Q811S7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubp1Q811S7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Mir770-201ENSMUST00000103252 94 ntBASIC16.19■□□□□ 0.18
Ubp1Q811S7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.19■□□□□ 0.18
Ubp1Q811S7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubp1Q811S7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.18■□□□□ 0.18
Ubp1Q811S7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms