Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trnp1Q80ZI1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trnp1Q80ZI1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gm14701-201ENSMUST00000117156 348 ntBASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gm18622-201ENSMUST00000219361 595 ntBASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trnp1Q80ZI1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Gm44872-201ENSMUST00000207864 420 ntBASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trnp1Q80ZI1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnp1Q80ZI1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Gm8396-201ENSMUST00000057361 823 ntBASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trnp1Q80ZI1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms