Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp8Q80U87 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Usp8Q80U87 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Usp8Q80U87 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Usp8Q80U87 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp8Q80U87 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Usp8Q80U87 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp8Q80U87 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Gm27000-201ENSMUST00000182943 842 ntBASIC16.51■□□□□ 0.23
Usp8Q80U87 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp8Q80U87 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Usp8Q80U87 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Gm18958-201ENSMUST00000174258 762 ntBASIC16.5■□□□□ 0.23
Usp8Q80U87 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.5■□□□□ 0.23
Usp8Q80U87 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp8Q80U87 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Usp8Q80U87 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.49■□□□□ 0.23
Usp8Q80U87 Gm3375-201ENSMUST00000203929 796 ntBASIC16.49■□□□□ 0.23
Usp8Q80U87 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.49■□□□□ 0.23
Usp8Q80U87 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp8Q80U87 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp8Q80U87 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms