Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.15■□□□□ 0.02
Pif1Q80SX8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Gm13312-201ENSMUST00000119631 718 ntBASIC15.14■□□□□ 0.01
Pif1Q80SX8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.14■□□□□ 0.01
Pif1Q80SX8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pif1Q80SX8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.13■□□□□ 0.01
Pif1Q80SX8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pif1Q80SX8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.12■□□□□ 0.01
Pif1Q80SX8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.12■□□□□ 0.01
Pif1Q80SX8 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.12■□□□□ 0.01
Pif1Q80SX8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Rps4l-201ENSMUST00000071745 943 ntBASIC15.12■□□□□ 0.01
Pif1Q80SX8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pif1Q80SX8 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.11■□□□□ 0.01
Pif1Q80SX8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms