Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.81■□□□□ 0.76
Sned1Q70E20 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.81■□□□□ 0.76
Sned1Q70E20 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.81■□□□□ 0.76
Sned1Q70E20 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.81■□□□□ 0.76
Sned1Q70E20 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sned1Q70E20 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.8■□□□□ 0.76
Sned1Q70E20 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Gm11745-201ENSMUST00000121669 448 ntBASIC19.8■□□□□ 0.76
Sned1Q70E20 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Gm25948-201ENSMUST00000175334 112 ntBASIC19.8■□□□□ 0.76
Sned1Q70E20 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sned1Q70E20 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sned1Q70E20 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sned1Q70E20 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.8■□□□□ 0.76
Sned1Q70E20 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.79■□□□□ 0.76
Sned1Q70E20 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sned1Q70E20 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.79■□□□□ 0.76
Sned1Q70E20 Gm5177-201ENSMUST00000183092 997 ntBASIC19.79■□□□□ 0.76
Sned1Q70E20 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sned1Q70E20 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm4518-201ENSMUST00000182638 718 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.78■□□□□ 0.76
Sned1Q70E20 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sned1Q70E20 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.78■□□□□ 0.76
Sned1Q70E20 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sned1Q70E20 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.77■□□□□ 0.76
Sned1Q70E20 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sned1Q70E20 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Sned1Q70E20 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.77■□□□□ 0.75
Sned1Q70E20 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sned1Q70E20 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sned1Q70E20 Gm9682-201ENSMUST00000197505 556 ntBASIC19.76■□□□□ 0.75
Sned1Q70E20 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sned1Q70E20 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sned1Q70E20 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sned1Q70E20 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms