Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.69■□□□□ 0.58
Ddx55Q6ZPL9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx55Q6ZPL9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx55Q6ZPL9 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx55Q6ZPL9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.65■□□□□ 0.58
Ddx55Q6ZPL9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ddx55Q6ZPL9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx55Q6ZPL9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx55Q6ZPL9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx55Q6ZPL9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx55Q6ZPL9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx55Q6ZPL9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx55Q6ZPL9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms