Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Gm9731-201ENSMUST00000209480 747 ntBASIC19.67■□□□□ 0.74
Casc1Q6TDU8 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Casc1Q6TDU8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc1Q6TDU8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.65■□□□□ 0.74
Casc1Q6TDU8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Casc1Q6TDU8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casc1Q6TDU8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Gm17661-201ENSMUST00000170317 270 ntBASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc1Q6TDU8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Gm10231-201ENSMUST00000181584 441 ntBASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Gm10175-202ENSMUST00000208752 441 ntBASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Il3ra-202ENSMUST00000223589 738 ntBASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Casc1Q6TDU8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms