Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dhx40Q6PE54 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dhx40Q6PE54 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dhx40Q6PE54 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dhx40Q6PE54 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dhx40Q6PE54 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dhx40Q6PE54 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dhx40Q6PE54 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Dhx40Q6PE54 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx40Q6PE54 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Actl10-202ENSMUST00000226583 1501 ntBASIC18.25■□□□□ 0.51
Dhx40Q6PE54 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms