Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.44■□□□□ 0.54
Abcf1Q6P542 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.44■□□□□ 0.54
Abcf1Q6P542 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abcf1Q6P542 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Gm15565-201ENSMUST00000118890 427 ntBASIC18.43■□□□□ 0.54
Abcf1Q6P542 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Gm30025-201ENSMUST00000218555 728 ntBASIC18.43■□□□□ 0.54
Abcf1Q6P542 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abcf1Q6P542 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abcf1Q6P542 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.41■□□□□ 0.54
Abcf1Q6P542 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.41■□□□□ 0.54
Abcf1Q6P542 Gm3375-201ENSMUST00000203929 796 ntBASIC18.41■□□□□ 0.54
Abcf1Q6P542 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcf1Q6P542 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms