Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Gm17661-201ENSMUST00000170317 270 ntBASIC17.71■□□□□ 0.43
Retreg2Q6NS82 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Mir1668-201ENSMUST00000184114 107 ntBASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retreg2Q6NS82 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Gm25016-201ENSMUST00000158399 131 ntBASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg2Q6NS82 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retreg2Q6NS82 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Gm18958-201ENSMUST00000174258 762 ntBASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Retreg2Q6NS82 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Gm9103-201ENSMUST00000119371 405 ntBASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retreg2Q6NS82 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg2Q6NS82 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms