Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.19■□□□□ 0.18
VclQ64727 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.19■□□□□ 0.18
VclQ64727 Gm18421-201ENSMUST00000204122 625 ntBASIC16.19■□□□□ 0.18
VclQ64727 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Gm45328-201ENSMUST00000210942 917 ntBASIC16.19■□□□□ 0.18
VclQ64727 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VclQ64727 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.19■□□□□ 0.18
VclQ64727 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.19■□□□□ 0.18
VclQ64727 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VclQ64727 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
VclQ64727 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VclQ64727 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.18■□□□□ 0.18
VclQ64727 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.18■□□□□ 0.18
VclQ64727 Gm21362-201ENSMUST00000194272 928 ntBASIC16.18■□□□□ 0.18
VclQ64727 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VclQ64727 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.17■□□□□ 0.18
VclQ64727 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Gm7284-201ENSMUST00000131667 944 ntBASIC16.17■□□□□ 0.18
VclQ64727 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VclQ64727 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VclQ64727 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.16■□□□□ 0.18
VclQ64727 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
VclQ64727 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VclQ64727 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.16■□□□□ 0.18
VclQ64727 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VclQ64727 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VclQ64727 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VclQ64727 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
VclQ64727 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VclQ64727 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VclQ64727 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.15■□□□□ 0.18
VclQ64727 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.15■□□□□ 0.18
VclQ64727 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.15■□□□□ 0.18
VclQ64727 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
VclQ64727 Gm27704-201ENSMUST00000185094 107 ntBASIC16.15■□□□□ 0.18
VclQ64727 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.15■□□□□ 0.18
VclQ64727 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.15■□□□□ 0.18
VclQ64727 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VclQ64727 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms