Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.14□□□□□ -0.15
Vamp1Q62442 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Gm2594-201ENSMUST00000214774 742 ntBASIC14.14□□□□□ -0.15
Vamp1Q62442 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.13□□□□□ -0.15
Vamp1Q62442 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Vamp1Q62442 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.13□□□□□ -0.15
Vamp1Q62442 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Vamp1Q62442 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp1Q62442 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.13□□□□□ -0.15
Vamp1Q62442 Flg-201ENSMUST00000050758 1488 ntBASIC14.12□□□□□ -0.15
Vamp1Q62442 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.12□□□□□ -0.15
Vamp1Q62442 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vamp1Q62442 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp1Q62442 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vamp1Q62442 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.11□□□□□ -0.15
Vamp1Q62442 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vamp1Q62442 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.11□□□□□ -0.15
Vamp1Q62442 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp1Q62442 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms