Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Tff3Q62395 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tff3Q62395 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff3Q62395 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.24□□□□□ -0.13
Tff3Q62395 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.24□□□□□ -0.13
Tff3Q62395 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff3Q62395 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff3Q62395 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.23□□□□□ -0.13
Tff3Q62395 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.23□□□□□ -0.13
Tff3Q62395 Gm44430-201ENSMUST00000203376 995 ntBASIC14.23□□□□□ -0.13
Tff3Q62395 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.23□□□□□ -0.13
Tff3Q62395 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Birc2-201ENSMUST00000054878 378 ntBASIC14.23□□□□□ -0.13
Tff3Q62395 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.23□□□□□ -0.13
Tff3Q62395 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff3Q62395 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff3Q62395 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tff3Q62395 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.22□□□□□ -0.13
Tff3Q62395 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.22□□□□□ -0.13
Tff3Q62395 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tff3Q62395 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.22□□□□□ -0.13
Tff3Q62395 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.22□□□□□ -0.13
Tff3Q62395 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Tff3Q62395 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tff3Q62395 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff3Q62395 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms