Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ss18Q62280 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ss18Q62280 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ss18Q62280 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ss18Q62280 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.17□□□□□ -0.46
Ss18Q62280 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Ss18Q62280 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ss18Q62280 Gm5643-201ENSMUST00000117081 966 ntBASIC12.17□□□□□ -0.46
Ss18Q62280 Gm20760-201ENSMUST00000179197 648 ntBASIC12.17□□□□□ -0.46
Ss18Q62280 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ss18Q62280 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.17□□□□□ -0.46
Ss18Q62280 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.17□□□□□ -0.46
Ss18Q62280 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ss18Q62280 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ss18Q62280 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.16□□□□□ -0.46
Ss18Q62280 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.16□□□□□ -0.46
Ss18Q62280 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.16□□□□□ -0.46
Ss18Q62280 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.16□□□□□ -0.46
Ss18Q62280 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ss18Q62280 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ss18Q62280 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ss18Q62280 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.16□□□□□ -0.46
Ss18Q62280 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ss18Q62280 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ss18Q62280 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ss18Q62280 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.15□□□□□ -0.46
Ss18Q62280 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.15□□□□□ -0.46
Ss18Q62280 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ss18Q62280 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ss18Q62280 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ss18Q62280 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ss18Q62280 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Ss18Q62280 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.14□□□□□ -0.47
Ss18Q62280 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.14□□□□□ -0.47
Ss18Q62280 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ss18Q62280 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.14□□□□□ -0.47
Ss18Q62280 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms