Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.7■□□□□ 0.1
CishQ62225 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CishQ62225 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CishQ62225 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CishQ62225 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.69■□□□□ 0.1
CishQ62225 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
CishQ62225 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Gm13216-201ENSMUST00000117145 591 ntBASIC15.69■□□□□ 0.1
CishQ62225 Gm14859-201ENSMUST00000117752 357 ntBASIC15.69■□□□□ 0.1
CishQ62225 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CishQ62225 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.69■□□□□ 0.1
CishQ62225 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.69■□□□□ 0.1
CishQ62225 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CishQ62225 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.69■□□□□ 0.1
CishQ62225 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CishQ62225 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CishQ62225 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CishQ62225 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CishQ62225 Gm27704-201ENSMUST00000185094 107 ntBASIC15.68■□□□□ 0.1
CishQ62225 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.68■□□□□ 0.1
CishQ62225 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.68■□□□□ 0.1
CishQ62225 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.68■□□□□ 0.1
CishQ62225 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CishQ62225 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CishQ62225 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.67■□□□□ 0.1
CishQ62225 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
CishQ62225 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CishQ62225 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CishQ62225 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.66■□□□□ 0.1
CishQ62225 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.66■□□□□ 0.1
CishQ62225 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Gm7367-201ENSMUST00000057611 492 ntBASIC15.66■□□□□ 0.1
CishQ62225 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.66■□□□□ 0.1
CishQ62225 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.66■□□□□ 0.1
CishQ62225 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CishQ62225 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms