Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.3■□□□□ 0.68
Scn9aQ62205 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.3■□□□□ 0.68
Scn9aQ62205 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.3■□□□□ 0.68
Scn9aQ62205 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Scn9aQ62205 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.29■□□□□ 0.68
Scn9aQ62205 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Scn9aQ62205 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Gm8396-201ENSMUST00000057361 823 ntBASIC19.29■□□□□ 0.68
Scn9aQ62205 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn9aQ62205 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.28■□□□□ 0.68
Scn9aQ62205 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.28■□□□□ 0.68
Scn9aQ62205 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.28■□□□□ 0.68
Scn9aQ62205 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scn9aQ62205 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn9aQ62205 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.27■□□□□ 0.68
Scn9aQ62205 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.27■□□□□ 0.68
Scn9aQ62205 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scn9aQ62205 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn9aQ62205 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Scn9aQ62205 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Scn9aQ62205 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.26■□□□□ 0.67
Scn9aQ62205 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scn9aQ62205 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.26■□□□□ 0.67
Scn9aQ62205 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scn9aQ62205 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.26■□□□□ 0.67
Scn9aQ62205 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scn9aQ62205 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn9aQ62205 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.25■□□□□ 0.67
Scn9aQ62205 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Scn9aQ62205 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.25■□□□□ 0.67
Scn9aQ62205 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn9aQ62205 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn9aQ62205 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn9aQ62205 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms