Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Rpa2Q62193 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpa2Q62193 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpa2Q62193 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.13■□□□□ 0.01
Rpa2Q62193 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpa2Q62193 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.12■□□□□ 0.01
Rpa2Q62193 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa2Q62193 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Rpa2Q62193 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Gm11355-201ENSMUST00000121120 306 ntBASIC15.11■□□□□ 0.01
Rpa2Q62193 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Gm23634-201ENSMUST00000175071 91 ntBASIC15.11■□□□□ 0.01
Rpa2Q62193 Gm37722-201ENSMUST00000193757 208 ntBASIC15.11■□□□□ 0.01
Rpa2Q62193 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa2Q62193 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa2Q62193 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpa2Q62193 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpa2Q62193 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Gm6659-201ENSMUST00000174752 547 ntBASIC15.1■□□□□ 0.01
Rpa2Q62193 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.1■□□□□ 0.01
Rpa2Q62193 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.1■□□□□ 0.01
Rpa2Q62193 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa2Q62193 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms