Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VcanQ62059 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.4■□□□□ 0.06
VcanQ62059 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
VcanQ62059 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.4■□□□□ 0.06
VcanQ62059 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VcanQ62059 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.39■□□□□ 0.05
VcanQ62059 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
VcanQ62059 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VcanQ62059 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
VcanQ62059 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.39■□□□□ 0.05
VcanQ62059 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.39■□□□□ 0.05
VcanQ62059 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VcanQ62059 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Gm25745-201ENSMUST00000174945 133 ntBASIC15.39■□□□□ 0.05
VcanQ62059 Gm18187-201ENSMUST00000196476 984 ntBASIC15.39■□□□□ 0.05
VcanQ62059 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
VcanQ62059 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
VcanQ62059 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VcanQ62059 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.38■□□□□ 0.05
VcanQ62059 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VcanQ62059 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VcanQ62059 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.38■□□□□ 0.05
VcanQ62059 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.38■□□□□ 0.05
VcanQ62059 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.38■□□□□ 0.05
VcanQ62059 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.38■□□□□ 0.05
VcanQ62059 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.38■□□□□ 0.05
VcanQ62059 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.38■□□□□ 0.05
VcanQ62059 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.38■□□□□ 0.05
VcanQ62059 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.38■□□□□ 0.05
VcanQ62059 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.38■□□□□ 0.05
VcanQ62059 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
VcanQ62059 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.38■□□□□ 0.05
VcanQ62059 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VcanQ62059 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.38■□□□□ 0.05
VcanQ62059 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.38■□□□□ 0.05
VcanQ62059 Gm27300-201ENSMUST00000184085 97 ntBASIC15.38■□□□□ 0.05
VcanQ62059 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VcanQ62059 Gm27335-201ENSMUST00000184758 97 ntBASIC15.38■□□□□ 0.05
VcanQ62059 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.38■□□□□ 0.05
VcanQ62059 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.38■□□□□ 0.05
VcanQ62059 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VcanQ62059 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VcanQ62059 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
VcanQ62059 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
VcanQ62059 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.37■□□□□ 0.05
VcanQ62059 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.37■□□□□ 0.05
VcanQ62059 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.37■□□□□ 0.05
VcanQ62059 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VcanQ62059 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.37■□□□□ 0.05
VcanQ62059 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VcanQ62059 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VcanQ62059 Gm13223-201ENSMUST00000118609 747 ntBASIC15.36■□□□□ 0.05
VcanQ62059 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.36■□□□□ 0.05
VcanQ62059 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.36■□□□□ 0.05
VcanQ62059 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
VcanQ62059 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.36■□□□□ 0.05
VcanQ62059 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms