Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rarb-207ENSMUST00000225921 2756 ntBASIC15.81■□□□□ 0.12
Rai1Q61818 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rai1Q61818 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rai1Q61818 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rai1Q61818 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.8■□□□□ 0.12
Rai1Q61818 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.8■□□□□ 0.12
Rai1Q61818 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
Rai1Q61818 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rai1Q61818 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.8■□□□□ 0.12
Rai1Q61818 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.8■□□□□ 0.12
Rai1Q61818 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rai1Q61818 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rai1Q61818 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Mir6404-201ENSMUST00000183699 94 ntBASIC15.79■□□□□ 0.12
Rai1Q61818 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rai1Q61818 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.79■□□□□ 0.12
Rai1Q61818 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rai1Q61818 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rai1Q61818 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rai1Q61818 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Gm11764-201ENSMUST00000120221 623 ntBASIC15.78■□□□□ 0.12
Rai1Q61818 Gm27646-201ENSMUST00000183989 110 ntBASIC15.78■□□□□ 0.12
Rai1Q61818 Gm27397-201ENSMUST00000184997 107 ntBASIC15.78■□□□□ 0.12
Rai1Q61818 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rai1Q61818 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.77■□□□□ 0.12
Rai1Q61818 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rai1Q61818 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.77■□□□□ 0.11
Rai1Q61818 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.77■□□□□ 0.11
Rai1Q61818 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rai1Q61818 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rai1Q61818 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.76■□□□□ 0.11
Rai1Q61818 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rai1Q61818 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.76■□□□□ 0.11
Rai1Q61818 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.76■□□□□ 0.11
Rai1Q61818 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rai1Q61818 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.76■□□□□ 0.11
Rai1Q61818 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms