Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.1□□□□□ -0.47
Foxc1Q61572 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.1□□□□□ -0.47
Foxc1Q61572 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Haglr-201ENSMUST00000100000 2085 ntBASIC12.1□□□□□ -0.47
Foxc1Q61572 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Foxc1Q61572 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Gm33142-201ENSMUST00000193913 867 ntBASIC12.09□□□□□ -0.47
Foxc1Q61572 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Foxc1Q61572 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxc1Q61572 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.09□□□□□ -0.47
Foxc1Q61572 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxc1Q61572 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Foxc1Q61572 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Foxc1Q61572 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Foxc1Q61572 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Foxc1Q61572 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Foxc1Q61572 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.08□□□□□ -0.48
Foxc1Q61572 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Gm7370-201ENSMUST00000219471 767 ntBASIC12.08□□□□□ -0.48
Foxc1Q61572 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.08□□□□□ -0.48
Foxc1Q61572 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxc1Q61572 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Foxc1Q61572 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms