Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ecm1Q61508 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ecm1Q61508 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.18■□□□□ 0.5
Ecm1Q61508 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ecm1Q61508 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ecm1Q61508 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ecm1Q61508 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ecm1Q61508 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ecm1Q61508 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Ecm1Q61508 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ecm1Q61508 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Gm7222-201ENSMUST00000117512 906 ntBASIC18.17■□□□□ 0.5
Ecm1Q61508 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.17■□□□□ 0.5
Ecm1Q61508 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Gm27702-201ENSMUST00000184512 56 ntBASIC18.17■□□□□ 0.5
Ecm1Q61508 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.17■□□□□ 0.5
Ecm1Q61508 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.17■□□□□ 0.5
Ecm1Q61508 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ecm1Q61508 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Gm14494-201ENSMUST00000118786 435 ntBASIC18.16■□□□□ 0.5
Ecm1Q61508 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.16■□□□□ 0.5
Ecm1Q61508 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ecm1Q61508 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.15■□□□□ 0.5
Ecm1Q61508 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ecm1Q61508 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Gm9727-201ENSMUST00000161387 555 ntBASIC18.15■□□□□ 0.5
Ecm1Q61508 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Ecm1Q61508 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.15■□□□□ 0.5
Ecm1Q61508 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.15■□□□□ 0.5
Ecm1Q61508 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ecm1Q61508 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ecm1Q61508 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.14■□□□□ 0.5
Ecm1Q61508 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ecm1Q61508 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.14■□□□□ 0.49
Ecm1Q61508 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ecm1Q61508 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.14■□□□□ 0.49
Ecm1Q61508 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.14■□□□□ 0.49
Ecm1Q61508 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.14■□□□□ 0.49
Ecm1Q61508 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.14■□□□□ 0.49
Ecm1Q61508 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ecm1Q61508 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ecm1Q61508 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ecm1Q61508 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms