Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.62■□□□□ 0.25
Six4Q61321 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.62■□□□□ 0.25
Six4Q61321 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Six4Q61321 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Six4Q61321 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six4Q61321 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six4Q61321 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Six4Q61321 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.6■□□□□ 0.25
Six4Q61321 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.6■□□□□ 0.25
Six4Q61321 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six4Q61321 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Six4Q61321 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Six4Q61321 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.59■□□□□ 0.25
Six4Q61321 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Six4Q61321 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.59■□□□□ 0.25
Six4Q61321 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.59■□□□□ 0.25
Six4Q61321 Gm36967-201ENSMUST00000193814 266 ntBASIC16.59■□□□□ 0.25
Six4Q61321 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Six4Q61321 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
Six4Q61321 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six4Q61321 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.59■□□□□ 0.25
Six4Q61321 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Six4Q61321 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.58■□□□□ 0.24
Six4Q61321 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.58■□□□□ 0.24
Six4Q61321 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.58■□□□□ 0.24
Six4Q61321 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.58■□□□□ 0.24
Six4Q61321 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.58■□□□□ 0.24
Six4Q61321 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Gm33142-201ENSMUST00000193913 867 ntBASIC16.58■□□□□ 0.24
Six4Q61321 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.58■□□□□ 0.24
Six4Q61321 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Six4Q61321 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.58■□□□□ 0.24
Six4Q61321 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Six4Q61321 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six4Q61321 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms