Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Scnn1aQ61180 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gm6296-201ENSMUST00000222599 943 ntBASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scnn1aQ61180 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Gm18195-201ENSMUST00000207604 706 ntBASIC18.88■□□□□ 0.61
Scnn1aQ61180 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.88■□□□□ 0.61
Scnn1aQ61180 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scnn1aQ61180 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.87■□□□□ 0.61
Scnn1aQ61180 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.87■□□□□ 0.61
Scnn1aQ61180 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.87■□□□□ 0.61
Scnn1aQ61180 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scnn1aQ61180 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.86■□□□□ 0.61
Scnn1aQ61180 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Gm6376-201ENSMUST00000209407 580 ntBASIC18.86■□□□□ 0.61
Scnn1aQ61180 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.86■□□□□ 0.61
Scnn1aQ61180 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scnn1aQ61180 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scnn1aQ61180 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Gm7862-201ENSMUST00000121461 292 ntBASIC18.84■□□□□ 0.61
Scnn1aQ61180 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Gm7506-201ENSMUST00000207758 815 ntBASIC18.84■□□□□ 0.61
Scnn1aQ61180 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.84■□□□□ 0.61
Scnn1aQ61180 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms