Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC23.63■■□□□ 1.37
Ptch1Q61115 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.63■■□□□ 1.37
Ptch1Q61115 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ptch1Q61115 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
Ptch1Q61115 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ptch1Q61115 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ptch1Q61115 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Ptch1Q61115 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Gm45747-201ENSMUST00000212203 999 ntBASIC23.62■■□□□ 1.37
Ptch1Q61115 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC23.62■■□□□ 1.37
Ptch1Q61115 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ptch1Q61115 AC132265.1-201ENSMUST00000219233 1665 ntBASIC23.62■■□□□ 1.37
Ptch1Q61115 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptch1Q61115 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ptch1Q61115 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Gm13365-201ENSMUST00000121188 973 ntBASIC23.61■■□□□ 1.37
Ptch1Q61115 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Mir7023-201ENSMUST00000185093 64 ntBASIC23.61■■□□□ 1.37
Ptch1Q61115 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Ptch1Q61115 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC23.61■■□□□ 1.37
Ptch1Q61115 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ptch1Q61115 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptch1Q61115 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Gm12892-201ENSMUST00000117367 1146 ntBASIC23.6■■□□□ 1.37
Ptch1Q61115 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC23.6■■□□□ 1.37
Ptch1Q61115 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC23.6■■□□□ 1.37
Ptch1Q61115 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptch1Q61115 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ptch1Q61115 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ptch1Q61115 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm15427-201ENSMUST00000117288 531 ntBASIC23.59■■□□□ 1.37
Ptch1Q61115 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.59■■□□□ 1.37
Ptch1Q61115 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm43808-201ENSMUST00000202534 2065 ntBASIC23.59■■□□□ 1.37
Ptch1Q61115 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Ptch1Q61115 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm11745-201ENSMUST00000121669 448 ntBASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC23.59■■□□□ 1.37
Ptch1Q61115 Gm25948-201ENSMUST00000175334 112 ntBASIC23.59■■□□□ 1.37
Ptch1Q61115 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptch1Q61115 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC23.58■■□□□ 1.37
Ptch1Q61115 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptch1Q61115 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Ptch1Q61115 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC23.58■■□□□ 1.37
Ptch1Q61115 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptch1Q61115 Gm11185-201ENSMUST00000117732 1007 ntBASIC23.58■■□□□ 1.36
Ptch1Q61115 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ptch1Q61115 AC093926.2-201ENSMUST00000214468 1228 ntBASIC23.58■■□□□ 1.36
Ptch1Q61115 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ptch1Q61115 Gm37194-201ENSMUST00000193092 3031 ntBASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms