Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.92□□□□□ -0.18
Scarb1Q61009 Gm18284-201ENSMUST00000172604 624 ntBASIC13.92□□□□□ -0.18
Scarb1Q61009 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.92□□□□□ -0.18
Scarb1Q61009 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.92□□□□□ -0.18
Scarb1Q61009 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scarb1Q61009 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Scarb1Q61009 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.91□□□□□ -0.18
Scarb1Q61009 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scarb1Q61009 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Scarb1Q61009 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scarb1Q61009 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Dio3-201ENSMUST00000097228 1449 ntBASIC13.9□□□□□ -0.18
Scarb1Q61009 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.9□□□□□ -0.18
Scarb1Q61009 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scarb1Q61009 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scarb1Q61009 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.89□□□□□ -0.19
Scarb1Q61009 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scarb1Q61009 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms