Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.2■□□□□ 0.18
Col12a1Q60847 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col12a1Q60847 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.19■□□□□ 0.18
Col12a1Q60847 Gm45612-201ENSMUST00000211320 160 ntBASIC16.19■□□□□ 0.18
Col12a1Q60847 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.19■□□□□ 0.18
Col12a1Q60847 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col12a1Q60847 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Gm25406-201ENSMUST00000157599 105 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.18■□□□□ 0.18
Col12a1Q60847 Gm5866-201ENSMUST00000177881 973 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.18■□□□□ 0.18
Col12a1Q60847 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col12a1Q60847 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.17■□□□□ 0.18
Col12a1Q60847 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.17■□□□□ 0.18
Col12a1Q60847 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.17■□□□□ 0.18
Col12a1Q60847 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col12a1Q60847 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Mir1895-201ENSMUST00000122615 79 ntBASIC16.17■□□□□ 0.18
Col12a1Q60847 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.17■□□□□ 0.18
Col12a1Q60847 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col12a1Q60847 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.16■□□□□ 0.18
Col12a1Q60847 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.16■□□□□ 0.18
Col12a1Q60847 Gm25948-201ENSMUST00000175334 112 ntBASIC16.16■□□□□ 0.18
Col12a1Q60847 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col12a1Q60847 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Gm45747-201ENSMUST00000212203 999 ntBASIC16.16■□□□□ 0.18
Col12a1Q60847 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.16■□□□□ 0.18
Col12a1Q60847 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col12a1Q60847 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.15■□□□□ 0.18
Col12a1Q60847 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.15■□□□□ 0.18
Col12a1Q60847 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.15■□□□□ 0.18
Col12a1Q60847 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.15■□□□□ 0.18
Col12a1Q60847 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.15■□□□□ 0.18
Col12a1Q60847 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col12a1Q60847 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col12a1Q60847 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.15■□□□□ 0.18
Col12a1Q60847 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.15■□□□□ 0.18
Col12a1Q60847 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms