Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3hdm4Q4VBF2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3hdm4Q4VBF2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
R3hdm4Q4VBF2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Gm45328-201ENSMUST00000210942 917 ntBASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3hdm4Q4VBF2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3hdm4Q4VBF2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3hdm4Q4VBF2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3hdm4Q4VBF2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
R3hdm4Q4VBF2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Gm27742-201ENSMUST00000184667 60 ntBASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms