Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brd9Q3UQU0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.34■□□□□ 0.53
Brd9Q3UQU0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brd9Q3UQU0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Brd9Q3UQU0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brd9Q3UQU0 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Gm11452-201ENSMUST00000122376 690 ntBASIC18.32■□□□□ 0.52
Brd9Q3UQU0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.32■□□□□ 0.52
Brd9Q3UQU0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brd9Q3UQU0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brd9Q3UQU0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brd9Q3UQU0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms