Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cks1brtQ3UNC9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cks1brtQ3UNC9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Golgb1-201ENSMUST00000023534 498 ntBASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Prob1-201ENSMUST00000097619 3021 ntBASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cks1brtQ3UNC9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1brtQ3UNC9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1brtQ3UNC9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Cks1brtQ3UNC9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cks1brtQ3UNC9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms