Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smcr8Q3UMB5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Gm34391-201ENSMUST00000203706 907 ntBASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.67■□□□□ 0.42
Smcr8Q3UMB5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Gm12895-201ENSMUST00000122214 226 ntBASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smcr8Q3UMB5 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smcr8Q3UMB5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smcr8Q3UMB5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smcr8Q3UMB5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Birc2-201ENSMUST00000054878 378 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms