Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Q3U1D9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Q3U1D9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Q3U1D9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U1D9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.27□□□□□ -0.13
Q3U1D9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.27□□□□□ -0.13
Q3U1D9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.27□□□□□ -0.13
Q3U1D9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Q3U1D9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Q3U1D9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Q3U1D9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Q3U1D9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U1D9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Q3U1D9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3U1D9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Q3U1D9 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.25□□□□□ -0.13
Q3U1D9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.25□□□□□ -0.13
Q3U1D9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.25□□□□□ -0.13
Q3U1D9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.25□□□□□ -0.13
Q3U1D9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Q3U1D9 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.25□□□□□ -0.13
Q3U1D9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.25□□□□□ -0.13
Q3U1D9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.25□□□□□ -0.13
Q3U1D9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.25□□□□□ -0.13
Q3U1D9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3U1D9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.24□□□□□ -0.13
Q3U1D9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3U1D9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms