Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim7Q3TJD7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim7Q3TJD7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pdlim7Q3TJD7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Gm7222-201ENSMUST00000117512 906 ntBASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim7Q3TJD7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim7Q3TJD7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.39■□□□□ 0.54
Pdlim7Q3TJD7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim7Q3TJD7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim7Q3TJD7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms