Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm11661-201ENSMUST00000121761 1327 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm43182-201ENSMUST00000199476 2528 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm12859-201ENSMUST00000117834 427 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm43179-201ENSMUST00000198797 275 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm15693-201ENSMUST00000120470 637 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm10499-201ENSMUST00000174094 934 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm15782-201ENSMUST00000121073 445 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Grk6-207ENSMUST00000225925 2769 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 CT485787.1-201ENSMUST00000225617 968 ntBASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Ush2AQ2QI47 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gm8515-201ENSMUST00000194852 576 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gm38318-201ENSMUST00000195769 1706 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gm13392-201ENSMUST00000117708 150 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gpr146-202ENSMUST00000053120 1040 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Gfra2-202ENSMUST00000227633 1480 ntBASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ush2AQ2QI47 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Mir7036b-201ENSMUST00000184791 63 ntBASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ush2AQ2QI47 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms