Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.45□□□□□ -0.1
Thbs3Q05895 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.45□□□□□ -0.1
Thbs3Q05895 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.45□□□□□ -0.1
Thbs3Q05895 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.45□□□□□ -0.1
Thbs3Q05895 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Thbs3Q05895 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thbs3Q05895 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Thbs3Q05895 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thbs3Q05895 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.43□□□□□ -0.1
Thbs3Q05895 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.43□□□□□ -0.1
Thbs3Q05895 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.43□□□□□ -0.1
Thbs3Q05895 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Thbs3Q05895 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Thbs3Q05895 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.42□□□□□ -0.1
Thbs3Q05895 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Gm5587-201ENSMUST00000206270 674 ntBASIC14.42□□□□□ -0.1
Thbs3Q05895 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.42□□□□□ -0.1
Thbs3Q05895 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms