Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Gm15173-201ENSMUST00000122049 433 ntBASIC15.15■□□□□ 0.02
Cacna1aP97445 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1aP97445 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1aP97445 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm12497-201ENSMUST00000138778 237 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm25911-201ENSMUST00000157621 56 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cacna1aP97445 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Cacna1aP97445 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1aP97445 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm4535-201ENSMUST00000182274 558 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm5745-201ENSMUST00000183748 313 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm7506-201ENSMUST00000207758 815 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm10355-201ENSMUST00000097146 517 ntBASIC15.14■□□□□ 0.01
Cacna1aP97445 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1aP97445 Gm14701-201ENSMUST00000117156 348 ntBASIC15.13■□□□□ 0.01
Cacna1aP97445 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.13■□□□□ 0.01
Cacna1aP97445 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1aP97445 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cacna1aP97445 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cacna1aP97445 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1aP97445 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1aP97445 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1aP97445 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1aP97445 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
Cacna1aP97445 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.13■□□□□ 0.01
Cacna1aP97445 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1aP97445 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.12■□□□□ 0.01
Cacna1aP97445 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1aP97445 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cacna1aP97445 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cacna1aP97445 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.12■□□□□ 0.01
Cacna1aP97445 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.12■□□□□ 0.01
Cacna1aP97445 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1aP97445 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms