Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Taf1bP97358 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.24■□□□□ 0.51
Taf1bP97358 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Taf1bP97358 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Taf1bP97358 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Taf1bP97358 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Taf1bP97358 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.23■□□□□ 0.51
Taf1bP97358 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Taf1bP97358 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Taf1bP97358 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Taf1bP97358 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Taf1bP97358 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Taf1bP97358 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Gm36967-201ENSMUST00000193814 266 ntBASIC18.22■□□□□ 0.51
Taf1bP97358 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.22■□□□□ 0.51
Taf1bP97358 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Taf1bP97358 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Taf1bP97358 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Taf1bP97358 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.21■□□□□ 0.51
Taf1bP97358 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Taf1bP97358 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Taf1bP97358 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.21■□□□□ 0.51
Taf1bP97358 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Taf1bP97358 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Taf1bP97358 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Taf1bP97358 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.21■□□□□ 0.51
Taf1bP97358 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Taf1bP97358 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.21■□□□□ 0.5
Taf1bP97358 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.2■□□□□ 0.5
Taf1bP97358 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Taf1bP97358 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Taf1bP97358 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44357-201ENSMUST00000195897 142 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm19658-201ENSMUST00000196231 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44367-201ENSMUST00000196836 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44350-201ENSMUST00000197197 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44390-201ENSMUST00000197533 144 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44313-201ENSMUST00000198018 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44486-201ENSMUST00000198508 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44314-201ENSMUST00000199263 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44394-201ENSMUST00000199558 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44484-201ENSMUST00000199873 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44466-201ENSMUST00000200264 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Gm44359-201ENSMUST00000200671 138 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.2■□□□□ 0.5
Taf1bP97358 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.2■□□□□ 0.5
Taf1bP97358 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.2■□□□□ 0.5
Taf1bP97358 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Taf1bP97358 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms