Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.26□□□□□ -0.13
Atf1P81269 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf1P81269 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atf1P81269 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Atf1P81269 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Gm7370-201ENSMUST00000219471 767 ntBASIC14.25□□□□□ -0.13
Atf1P81269 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf1P81269 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.25□□□□□ -0.13
Atf1P81269 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Gm2274-201ENSMUST00000184539 609 ntBASIC14.24□□□□□ -0.13
Atf1P81269 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.24□□□□□ -0.13
Atf1P81269 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.24□□□□□ -0.13
Atf1P81269 Gm30025-201ENSMUST00000218555 728 ntBASIC14.24□□□□□ -0.13
Atf1P81269 Gm18115-201ENSMUST00000221209 621 ntBASIC14.24□□□□□ -0.13
Atf1P81269 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Atf1P81269 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf1P81269 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Atf1P81269 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.23□□□□□ -0.13
Atf1P81269 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Atf1P81269 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf1P81269 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Atf1P81269 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Atf1P81269 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf1P81269 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf1P81269 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.23□□□□□ -0.13
Atf1P81269 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf1P81269 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atf1P81269 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atf1P81269 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Atf1P81269 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Atf1P81269 Gm13474-201ENSMUST00000122466 815 ntBASIC14.22□□□□□ -0.13
Atf1P81269 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.22□□□□□ -0.13
Atf1P81269 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.22□□□□□ -0.13
Atf1P81269 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf1P81269 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf1P81269 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Atf1P81269 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf1P81269 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf1P81269 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms