Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim4P70271 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pdlim4P70271 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.7□□□□□ -0.22
Pdlim4P70271 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.7□□□□□ -0.22
Pdlim4P70271 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.69□□□□□ -0.22
Pdlim4P70271 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdlim4P70271 Gm21559-201ENSMUST00000220638 855 ntBASIC13.69□□□□□ -0.22
Pdlim4P70271 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.69□□□□□ -0.22
Pdlim4P70271 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Gm8587-201ENSMUST00000076538 843 ntBASIC13.69□□□□□ -0.22
Pdlim4P70271 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim4P70271 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim4P70271 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim4P70271 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim4P70271 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim4P70271 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim4P70271 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim4P70271 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pdlim4P70271 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim4P70271 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.68□□□□□ -0.22
Pdlim4P70271 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim4P70271 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.67□□□□□ -0.22
Pdlim4P70271 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Gm10566-201ENSMUST00000086739 996 ntBASIC13.67□□□□□ -0.22
Pdlim4P70271 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim4P70271 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim4P70271 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.66□□□□□ -0.22
Pdlim4P70271 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Gm13186-201ENSMUST00000118031 316 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms