Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Flg-201ENSMUST00000050758 1488 ntBASIC16.35■□□□□ 0.21
Crnkl1P63154 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.34■□□□□ 0.21
Crnkl1P63154 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.34■□□□□ 0.21
Crnkl1P63154 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Crnkl1P63154 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crnkl1P63154 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crnkl1P63154 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Crnkl1P63154 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Crnkl1P63154 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crnkl1P63154 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crnkl1P63154 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.33■□□□□ 0.2
Crnkl1P63154 Gm37856-201ENSMUST00000191634 999 ntBASIC16.33■□□□□ 0.2
Crnkl1P63154 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Crnkl1P63154 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crnkl1P63154 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.32■□□□□ 0.2
Crnkl1P63154 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Crnkl1P63154 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Crnkl1P63154 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Crnkl1P63154 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Dio3-201ENSMUST00000097228 1449 ntBASIC16.32■□□□□ 0.2
Crnkl1P63154 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crnkl1P63154 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Crnkl1P63154 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.31■□□□□ 0.2
Crnkl1P63154 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Crnkl1P63154 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms