Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ThraP63058 Gm7284-201ENSMUST00000131667 944 ntBASIC16.65■□□□□ 0.26
ThraP63058 Ank2-226ENSMUST00000189368 339 ntBASIC16.65■□□□□ 0.26
ThraP63058 Gm5587-201ENSMUST00000206270 674 ntBASIC16.65■□□□□ 0.26
ThraP63058 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.65■□□□□ 0.26
ThraP63058 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.65■□□□□ 0.26
ThraP63058 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ThraP63058 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ThraP63058 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ThraP63058 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.64■□□□□ 0.25
ThraP63058 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ThraP63058 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.64■□□□□ 0.25
ThraP63058 Gm9103-201ENSMUST00000119371 405 ntBASIC16.64■□□□□ 0.25
ThraP63058 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
ThraP63058 Gm9013-201ENSMUST00000132939 882 ntBASIC16.64■□□□□ 0.25
ThraP63058 Gm27741-201ENSMUST00000185060 237 ntBASIC16.64■□□□□ 0.25
ThraP63058 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.64■□□□□ 0.25
ThraP63058 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ThraP63058 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
ThraP63058 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
ThraP63058 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ThraP63058 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.63■□□□□ 0.25
ThraP63058 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
ThraP63058 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ThraP63058 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ThraP63058 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ThraP63058 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ThraP63058 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.62■□□□□ 0.25
ThraP63058 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ThraP63058 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ThraP63058 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ThraP63058 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.61■□□□□ 0.25
ThraP63058 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ThraP63058 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.61■□□□□ 0.25
ThraP63058 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ThraP63058 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ThraP63058 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ThraP63058 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ThraP63058 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms